Sharedsupport / 2016-12-18-new-R.sagewsOpen in CoCalc
Examples for support purposes...
%r
R.Version()
$platform
'x86_64-pc-linux-gnu'
$arch
'x86_64'
$os
'linux-gnu'
$system
'x86_64, linux-gnu'
$status
''
$major
'3'
$minor
'3.2'
$year
'2016'
$month
'10'
$day
'31'
$`svn rev`
'71607'
$language
'R'
$version.string
'R version 3.3.2 (2016-10-31)'
$nickname
'Sincere Pumpkin Patch'
%r
ip <- as.data.frame(installed.packages()[,c(1,3:4)])
rownames(ip) <- NULL
ip <- ip[is.na(ip$Priority),1:2,drop=FALSE]
print(ip, row.names=FALSE)
Package Version ADGofTest 0.3 AER 1.2-4 AppliedPredictiveModeling 1.1-6 BB 2014.10-1 BH 1.62.0-1 BMS 0.3.4 CARBayes 4.6 CARBayesdata 2.0 CORElearn 1.48.0 Cairo 1.5-9 Cubist 0.0.19 DBI 0.5-1 DT 0.2 DistributionUtils 0.5-1 GEOquery 2.34.0 GGally 1.3.0 GPArotation 2014.11-1 GeneralizedHyperbolic 0.8-1 Heatplus 2.14.0 HistData 0.7-8 IRdisplay 0.4.4 IRkernel 0.7.1 ISLR 1.0 ISwR 2.0-7 Lahman 5.0-0 MCMCglmm 2.24 MLmetrics 1.1.1 ModelMetrics 1.1.0 NORMT3 1.0-3 PKI 0.1-3 R.cache 0.12.0 R.methodsS3 1.7.1 R.oo 1.21.0 R.rsp 0.40.0 R6 2.2.0 RANN 2.5 RJSONIO 1.3-0 Rcgmin 2013-2.21 Rcpp 0.12.8 RcppEigen 0.3.2.9.0 Rcsdp 0.1.55 RgoogleMaps 1.4.1 Rmpfr 0.6-1 Rvmmin 2013-11.12 SemiParBIVProbit 3.8 SkewHyperbolic 0.3-2 StanHeaders 2.12.0-1 TH.data 1.0-7 TTR 0.23-1 TeachingDemos 2.10 UsingR 2.0-5 VineCopula 2.0.5 afex 0.16-1 affyPLM 1.44.0 affydata 1.16.0 aplpack 1.3.0 arm 1.9-3 ascii 2.1 assertthat 0.1 backports 1.0.4 bdsmatrix 1.3-2 bigmemory 4.5.19 bigmemory.sri 0.1.3 bio3d 2.3-1 bit 1.1-12 bit64 0.9-5 broom 0.4.1 ca 0.64 calibrator 1.2-6 caret 6.0-73 circular 0.4-7 cmprsk 2.2-7 coda 0.19-1 coin 1.1-3 colourpicker 0.3 contfrac 1.1-10 conting 1.6 copula 0.999-15 corpcor 1.6.8 covr 2.2.1 crayon 1.3.2 crs 0.15-24 curl 2.3 data.table 1.10.0 ddCt 1.22.0 deSolve 1.14 devtools 1.12.0 dfoptim 2016.7-1 digest 0.6.10 dplyr 0.5.0 dtplyr 0.0.1 dygraphs 1.1.1.3 dynamicTreeCut 1.63-1 dynlm 0.3-5 earth 4.4.7 ellipse 0.3-8 elliptic 1.3-7 emulator 1.2-15 entropy 1.2.1 estimability 1.2 etm 0.6-2 evaluate 0.10 fastICA 1.2-0 ff 2.2-13 fields 8.7 forecast 7.3 fracdiff 1.4-2 gamlss.dist 5.0-0 gapminder 0.2.0 gcrma 2.40.0 gee 4.13-19 geepack 1.2-1 geneplotter 1.46.0 geosphere 1.5-5 ggmap 2.6.1 ggplot2 2.2.0 ggthemes 3.3.0 git2r 0.16.0 glmnet 2.0-5 gmailr 0.7.1 gmp 0.5-12 gnm 1.0-8 gridExtra 2.2.1 gtable 0.2.0 hexbin 1.27.1 hgu133plus2.db 3.1.3 hgu133plus2cdf 2.16.0 hgu95av2.db 3.1.3 hgu95av2cdf 2.16.0 highr 0.6 hms 0.3 htmltools 0.3.5 htmlwidgets 0.8 httpuv 1.3.3 httr 1.2.1 hunspell 2.3 hypergeo 1.2-13 ineq 0.2-13 infotheo 1.2.0 ipred 0.9-5 jpeg 0.1-8 jsonlite 1.1 kdecopula 0.7.0 kernlab 0.9-25 klaR 0.6-12 kmi 0.5.1 knitr 1.15.1 ks 1.10.4 lars 1.2 lava 1.4.5 lavaan 0.5-22 lazyeval 0.2.0 lintr 1.0.0 listviewer 1.4.0 lme4 1.1-12 lmerTest 2.0-33 locfit 1.5-9.1 logspline 2.1.9 loo 0.1.6 lsmeans 2.25 lubridate 1.6.0 magic 1.5-6 maptree 1.4-7 markdown 0.7.7 matrixcalc 1.0-3 mclust 5.2 mda 0.4-9 mediation 4.4.5 memoise 1.0.0 mi 1.0 microbenchmark 1.4-2.1 mime 0.5 miniUI 0.1.1 mitools 2.3 mlbench 2.1-1 mlmRev 1.0-6 mlogit 0.2-4 modeltools 0.2-21 multcompView 0.1-7 multicool 0.1-10 mvtnorm 1.0-5 network 1.13.0 nortest 1.0-4 np 0.60-2 nycflights13 0.2.0 oligoClasses 1.30.0 openssl 0.9.5 optextras 2016-8.8 optimx 2013.8.7 ordinal 2015.6-28 org.Hs.eg.db 3.1.2 pROC 1.8 packrat 0.4.8-1 pamr 1.55 party 1.1-2 pbapply 1.3-1 pbdZMQ 0.2-4 pbivnorm 0.6.0 pbkrtest 0.4-6 pcaPP 1.9-61 plm 1.6-5 plotly 4.5.6 plotmo 3.3.2 pls 2.5-0 png 0.1-7 praise 1.0.0 prettyunits 1.0.2 prodlim 1.5.7 progress 1.1.1 proxy 0.4-16 pspline 1.0-17 psych 1.6.9 purrr 0.2.2 qrng 0.0-3 quantmod 0.4-7 readr 1.0.0 repr 0.10 rethinking 1.59 rex 1.1.1 rmarkdown 1.2 roxygen2 5.0.1 rprojroot 1.1 rsconnect 0.6 rsm 2.8 rstan 2.12.1 rstudioapi 0.6 rugarch 1.3-6 rversions 1.0.3 sampleSelection 1.0-4 scales 0.4.1 sem 3.1-8 setRNG 2013.9-1 shapefiles 0.7 shiny 0.14.2 shinyjs 0.8 shinystan 2.2.1 shinythemes 1.1.1 sourcetools 0.1.5 spd 2.0-1 spdep 0.6-8 spls 2.2-1 stringdist 0.9.4.2 stringi 1.1.2 subselect 0.12-6 superpc 1.09 survey 3.31-5 svUnit 0.7-12 swirl 2.4.2 systemfit 1.1-18 tensorA 0.36 testthat 1.0.2 threejs 0.2.2 tibble 1.2 tidyr 0.6.0 truncdist 1.0-2 truncreg 0.2-4 trust 0.1-7 ucminf 1.1-4 uuid 0.1-2 vcdExtra 0.7-0 viridisLite 0.1.3 webshot 0.3.2 whisker 0.3-2 withr 1.0.2 xml2 1.0.0 xtable 1.8-2 yaml 2.1.14 zlibbioc 1.14.0 AMORE 0.2-15 Amelia 1.7.3 AnnotationDbi 1.30.1 BBmisc 1.9 BSgenome 1.36.2 BatchJobs 1.6 Biobase 2.28.0 BiocGenerics 0.14.0 BiocInstaller 1.18.5 BiocParallel 1.2.6 Biostrings 2.36.1 BoolNet 2.1.1 BradleyTerry2 1.0-6 DBI 0.3.1 DEoptimR 1.0-3 DiagnosisMed 0.2.3 DoseFinding 0.9-12 Epi 1.1.67 Formula 1.2-1 GenABEL 1.8-0 GenABEL.data 1.0.0 GenomeInfoDb 1.4.1 GenomicAlignments 1.4.1 GenomicFeatures 1.20.1 GenomicRanges 1.20.5 Gviz 1.12.1 HilbertVis 1.26.0 Hmisc 3.16-0 IRanges 2.2.5 LearnBayes 2.15 MALDIquant 1.12 MALDIquantForeign 0.9 MCMCpack 1.3-3 MNP 2.6-4 MatchIt 2.4-21 R.methodsS3 1.7.0 R.oo 1.19.0 R.utils 2.1.0 RColorBrewer 1.1-2 RCurl 1.95-4.3 RGtk2 2.20.31 RMySQL 0.10.4 RNetCDF 1.6.3-1 ROCR 1.0-7 RODBC 1.3-14 RPostgreSQL 0.4 RQuantLib 0.4.0 RSQLite 1.0.0 RSclient 0.7-3 RUnit 0.4.29 RandomFields 3.0.44 RaschSampler 0.8-6 Rcpp 0.12.0 RcppArmadillo 0.5.400.2.0 RcppEigen 0.3.2.5.0 Rglpk 0.6-1 Rmpi 0.6-5 Rniftilib 0.0-32 Rsamtools 1.20.4 Rserve 1.7-3 Rsolnp 1.14 Rsymphony 0.1-21 S4Vectors 0.6.2 ShortRead 1.26.0 SparseM 1.7 TH.data 1.0-6 TeachingDemos 2.9 VGAM 0.9-8 VariantAnnotation 1.14.6 WDI 2.4 XML 3.98-1.3 XMLRPC 0.3-0 XVector 0.8.0 Zelig 4.2-1 abind 1.4-3 acepack 1.3-3.3 ade4 1.7-2 affy 1.46.1 affyio 1.36.0 altcdfenvs 2.30.0 annotate 1.46.1 ape 3.3 aroma.light 2.4.0 base64enc 0.1-2 bayesm 3.0-2 beeswarm 0.2.0 biomaRt 2.24.0 biovizBase 1.16.0 bitops 1.0-6 blockmodeling 0.1.8 brew 1.0-6 brglm 0.5-9 caTools 1.17.1 cairoDevice 2.22 car 2.0-26 checkmate 1.6.0 chron 2.3-47 coda 0.17-1 colorspace 1.2-4 combinat 0.0-8 crayon 1.3.0 cubature 1.1-2 cummeRbund 2.10.0 date 1.2-34 deal 1.2-37 deldir 0.1-9 dichromat 2.0-0 digest 0.6.8 doMC 1.3.3 doParallel 1.0.8 doSNOW 1.0.12 downloader 0.3 e1071 1.6-7 eRm 0.14-0 eco 3.1-7 ecodist 1.2.9 edgeR 3.10.2 effects 3.0-4 energy 1.6.2 epiR 0.9-62 epibasix 1.3 epicalc 2.15.1.0 epitools 0.5-7 evaluate 0.5.5 evd 2.3-0 expm 0.99-1.1 fAsianOptions 3010.79 fAssets 3011.83 fBasics 3011.87 fBonds 3010.77 fCopulae 3011.81 fExoticOptions 2152.78 fExtremes 3010.81 fGarch 3010.82 fImport 3000.82 fMultivar 3011.78 fNonlinear 3010.78 fOptions 3010.83 fPortfolio 3011.81 fRegression 3011.81 fTrading 3010.78 fUnitRoots 3010.78 fail 1.2 fastcluster 1.1.16 fastmatch 1.0-4 foreach 1.4.2 futile.logger 1.4.1 futile.options 1.0.0 g.data 2.4 gam 1.12 gbm 2.1 gdata 2.17.0 genefilter 1.50.0 genetics 1.3.8.1 getopt 1.20.0 ggplot2 1.0.1 gmaps 0.2 gmodels 2.16.2 gplots 2.17.0 graph 1.46.0 gregmisc 2.1.5 gridExtra 2.0.0 gsl 1.9-10 gss 2.1-5 gtable 0.1.2 gtools 3.5.0 haplo.stats 1.6.11 hdf5 1.6.10 hwriter 1.3.2 hypergraph 1.40.0 igraph 0.7.1 inline 0.3.14 int64 1.1.2 iterators 1.0.7 its 1.1.8 kernlab 0.9-22 labeling 0.3 lambda.r 1.1.7 latticeExtra 0.6-26 lhs 0.10 limma 3.24.14 littler 0.3.1 lme4 1.1-8 lmtest 0.9-34 lpSolve 5.6.11 mFilter 0.1-3 magrittr 1.5 makecdfenv 1.44.0 mapdata 2.2-4 mapproj 1.2-3 maps 2.3-10 matrixStats 0.14.2 maxLik 1.2-0 medAdherence 1.03 memoise 0.2.1 minqa 1.2.4 misc3d 0.8-4 miscTools 0.6-16 mixtools 1.0.2 mnormt 1.5-3 msm 1.5 multcomp 1.4-1 multicore 0.2 multtest 2.24.0 munsell 0.4.2 mvnormtest 0.1-9 mvtnorm 1.0-3 ncdf4 1.13 nloptr 1.0.4 nnls 1.4 numDeriv 2014.2-1 nws 2.0.0.3 optparse 1.2.0 pbkrtest 0.4-2 permute 0.8-3 phangorn 1.99-13 pkgKitten 0.1.3 plotrix 3.5-7 plyr 1.8.3 polspline 1.1.12 polyCub 0.5-1 polyclip 1.3-0 preprocessCore 1.30.0 profileModel 0.5-9 proto 0.3-10 pscl 1.4.9 psy 1.1 pvclust 1.3-2 pwt 7.1-1 pwt8 8.1-0 qtl 1.36-6 quadprog 1.5-5 quantreg 5.11 qvalue 2.0.0 qvcalc 0.8-9 rJava 0.9-7 randomForest 4.6-10 readBrukerFlexData 1.8.2 readMzXmlData 2.8 readxl 0.1.0 relimp 1.0-4 reshape 0.8.5 reshape2 1.4 rggobi 2.1.20 rgl 0.95.1247 rjags 4-6 rjson 0.2.15 rms 4.3-1 rneos 0.2-8 robustbase 0.92-5 rsdmx 0.4-7 rsprng 1.0 rtracklayer 1.28.6 sandwich 2.3-3 scales 0.2.5 scatterplot3d 0.3-36 segmented 0.5-0.0 sendmailR 1.2-1 seqinr 3.1-3 seroincidence 1.0.4 slam 0.1-32 sm 2.2-5.4 sn 1.2-3 snow 0.3-13 snpStats 1.18.0 sp 1.0-15 spam 1.0-1 spatstat 1.37-0 spc 0.5.1 stabledist 0.7-0 statmod 1.4.21 stringr 0.6.2 strucchange 1.5-1 tcltk2 1.2-11 tensor 1.5 testthat 0.9.1 timeDate 3012.100 timeSeries 3012.99 tkrplot 0.0-23 truncnorm 1.0-7 tseries 0.10-34 urca 1.2-8 vcd 1.4-1 vegan 2.3-0 vioplot 0.2 xtable 1.7-4 xts 0.9-7 zoo 1.7-12